Job Description P76049 Confidence 99.91% Date Thu Jan 5 12:17:51 GMT 2012 Rank 92 Aligned Residues 253 % Identity 11% Template c1wprA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sigma factor sigb regulation protein rsbq; PDBTitle: crystal structure of rsbq inhibited by pmsf Resolution 2.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	Y	Q	A	I	V	L	S	H	P	G	G	G	V	K	E	Q	T	A	G	T	Y	A	K	K	L	A	E	K	G	F	V	T	I	A	Y	D	A	S	Y	Q	G	E	S	G	G	E	P	R	Q	L	E	N	P	Y	I	R	T	E	D	I	S	A	V	I	D	Y	L	T	T	L	S	Y	V	D	N	T	R
Query Conservation
Alig confidence																									.							.																																											.	.	.	.	.
Template Conservation																									.							.																																											.	.	.	.	.
Template Sequence		G	S	G	K	A	S	I	M	F	A	P	G	F	G	C	D	Q	S	V	W	N	A	V	.	A	P	A	F	E	E	.	D	H	R	V	I	L	F	D	Y	V	G	S	G	H	S	D	L	Y	D	L	N	R	Y	Q	T	L	D	G	Y	A	Q	D	V	L	D	V	C	E	A	L	D	L	.	.	.	.	.	K	E
Template Known Secondary structure					S	S								T	T			G	G	G	G	T	T	T	.	G	G	G	G	T	T	.	T	S								T	T	T	S	S	S					T	G	G	G	S	S															T	T		.	.	.	.	.	S
Template Predicted Secondary structure																									.							.																																											.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	M	G	I	C	A	G	A	G	Y	T	A	N	A	A	I	Q	D	R	R	I	K	A	I	G	T	V	S	A	V	N	I	G	S	I	F	R	N	G	W	E	N	N	V	K	S	I	D	A	L	P	Y	V	E	A	G	S	N	A	R	T	S	D	I	S	S	G	E	Y	A	I	M	P	L	A	P	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	F	V	G	H	S	V	G	A	L	I	G	M	L	A	S	I	R	R	P	E	L	F	S	H	L	V	M	V	G	P	S	P	C	Y	L	N	D	P	P	E	Y	Y	G	G	F	E	E	E	Q	L	L	G	L	L	E	M	M	E	K	N	Y	I	G	W	A	T	V	F	A	A	T	V	L	N	Q	P	D	R
Template Known Secondary structure								T														G	G	G								S			S	B		B			T	T	T				S	B															T																T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	D	A	P	N	E	E	L	R	Q	A	W	E	Y	Y	H	T	P	R	A	Q	Y	P	T	A	P	G	Y	A	T	L	R	S	L	N	Q	I	I	T	Y	D	A	Y	H	M	A	E	V	Y	L	T	Q	P	T	Q	I	V	A	G	S	Q	A	G	S	K	W	M	S	D	D	L	Y	D	R	A	S	S	Q	D
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	I	K	E	E	L	E	S	R	F	C	S	T	D	P	V	I	A	R	Q	F	A	K	A	A	F	F	S	D	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	S	K	V	T	V	P	S	L	I	L	Q	C	A	D	D	I	I	A	P	A	T	V	G	K	Y	M	H	Q	H	L	P	Y
Template Known Secondary structure														T	S														T		B			.	.	.	.	.	.	.	.	.	.	.	.	.				T	T			S									S		S	S	S												S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.														.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Y	H	I	V	E	G	A	N	H	M	D	L	Y	D	G	K	A	Y	V	A	E	A	I	S	V	L	A	P	F	F	E	E	T	L
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		S	S	L	K	Q	M	E	A	R	G	H	C	P	H	M	S	H	P	D	E	T	I	Q	L	I	.	.	.	G	D	Y	L	K	A	H	V
Template Known Secondary structure											S	S															.	.	.							T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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