Job Description P0AAR8 Confidence 96.91% Date Thu Jan 5 11:13:37 GMT 2012 Rank 24 Aligned Residues 52 % Identity 29% Template c8iczA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar) Resolution 3.10 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.													.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	A	E	E	L	A	R	A	M	N	G	V	G	L	K	K	A	Q	A	I	V	S	Y	R	E	E	Y	G	P	F	K	T	V	E	D	L	K	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	P	G	M	G	N	S	L	V	E	R	N	L	A	V
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																			.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																			.
Template Sequence		K	S	G	A	E	A	.	K	K	L	P	G	V	G	T	K	I	A	E	K	I	D	E	F	L	.	A	T	G	K	L	R	K	L	E	K	I	R	Q	D	D	T	S	S	S	I	N	F	L	T	R	V	S	G	I	G	P	S	A	A	R	K	F	V	D	E
Template Known Secondary structure								.		T	S	T	T														.		S	S	S																				T	T	S	T	T											T	T
Template Predicted Secondary structure								.																			.
Template SS confidence
		54	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions