Job Description P0AAR8 Confidence 99.03% Date Thu Jan 5 11:13:37 GMT 2012 Rank 8 Aligned Residues 61 % Identity 21% Template c3psfA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) Resolution 2.59 Å

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		62	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure									.	.	.	.	.																						.
Query SS confidence									.	.	.	.	.																						.
Query Sequence		V	S	I	N	N	A	S	.	.	.	.	.	A	E	E	L	A	R	A	M	N	G	V	G	L	K	K	A	Q	A	I	V	S	.	Y	R	E	E	Y	G	P	F	K	T	V	E	D	L	K	Q	V	P	G	M	G	N	S	L	V	E	R	N	L	A	V	L	T	L
Query Conservation									.	.	.	.	.																						.
Alig confidence									.	.	.	.	.					.																	.
Template Conservation																		.
Template Sequence		V	E	V	N	K	A	T	D	N	N	Y	Y	A	S	A	L	.	K	Y	I	S	G	F	G	K	R	K	A	I	D	F	L	Q	S	L	Q	R	L	N	E	P	L	L	A	R	Q	Q	L	I	T	H	N	I	L	H	K	T	I	F	M	N	S	A	G	F	L	Y	I
Template Known Secondary structure									T						T	T	G	.	G	G	S	T	T																T		S					T	T					T	T	S	S									T	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		933	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.		.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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