Job Description P0AAR8 Confidence 48.81% Date Thu Jan 5 11:13:37 GMT 2012 Rank 123 Aligned Residues 42 % Identity 24% Template c2zkqm_ PDB info PDB header:ribosomal protein/rna Chain: M: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	A	M	N	G	V	G	L	K	K	A	Q	A	I	V	S	Y	R	E	E	Y	G	P	F	K	T	V	E	D	L	K	Q	V	P	G	M	G	N	S	L	V	E	R	N	L	A	V	L
Query Conservation
Alig confidence			.																	.	.	.	.	.	.	.
Template Conservation			.																	.	.	.	.	.	.	.
Template Sequence		I	.	T	A	I	K	G	V	G	R	R	Y	A	H	V	V	L	R	.	.	.	.	.	.	.	K	A	D	I	D	L	T	K	R	A	G	E	L	T	E	D	E	V	E	R	V	I	T	I	M
Template Known Secondary structure		G	.	G	G	S	T	T												.	.	.	.	.	.	.			T			T	T	S	B	T	T	T	S
Template Predicted Secondary structure			.																	.	.	.	.	.	.	.
Template SS confidence
		30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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