Job Description P0AAR8 Confidence 50.54% Date Thu Jan 5 11:13:37 GMT 2012 Rank 119 Aligned Residues 55 % Identity 11% Template c2xznM_ PDB info PDB header:ribosome Chain: M: PDB Molecule:rps18e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	R	V	S	I	N	N	A	S	A	E	E	L	A	R	A	M	N	G	V	G	L	K	K	A	Q	A	I	V	S	Y	R	E	E	Y	G	P	F	K	T	V	E	D	L	K	Q	V	P	G	M	G	N	S	L	V	E	R	N	L	A	V	L
Query Conservation
Alig confidence																.																	.	.	.	.	.	.	.
Template Conservation																.																	.	.	.	.	.	.	.
Template Sequence		N	T	N	I	D	G	K	R	I	T	P	I	A	L	.	T	G	I	R	G	I	G	R	R	F	A	Y	I	I	C	K	.	.	.	.	.	.	.	V	L	K	I	D	P	N	A	R	A	G	L	L	T	E	D	Q	C	N	K	I	T	D	L	I
Template Known Secondary structure		T	T					S	S							.	T	T	S	T	T												.	.	.	.	.	.	.		T	T			S	S	S		S	S		S
Template Predicted Secondary structure																.																	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions