Job Description P37642 Confidence 2.68% Date Thu Jan 5 11:56:15 GMT 2012 Rank 57 Aligned Residues 209 % Identity 8% Template d1v54c_ SCOP info Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	A	T	L	K	N	T	I	N	T	A	V	Q	Q	R	T	T	V	G	L	V	G	L	A	V	A	L	Y	S	G	I	N	W	M	G	N	L	R	E	A	I	R	A	Q	S	R	D	V	W	E	R	S	P	Q	D	Q	E	K	F	W	V	K	Y	L	R	D	F	I	S	L	I	G	L	L	I	A	L	I
Query Conservation
Alig confidence																																												.	.	.	.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		S	A	L	L	M	T	S	G	L	T	M	W	F	H	F	N	S	M	T	L	L	M	I	G	L	T	T	N	M	L	T	M	Y	Q	W	W	R	D	V	I	R	E	.	.	.	.	.	S	T	F	Q	G	H	H	T	P	A	V	Q	K	G	L	R	Y	G	M	I	L	F	I	I	S	E	V	L	F	F	T	G	F
Template Known Secondary structure																	S																											.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	L	S	I	T	S	V	A	G	S	A	Q	Q	M	I	I	S	A	L	H	L	N	S	I	E	W	L	K	P	T	W	R	L	I	G	L	A	I	S	I	F	A	N	Y	L	L	F	F	W	I	F	W	R	L	P	R	H	R	P	R	K	K	A	L	I	R	G	T	F	L	A	A	I	G	F	E	V	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	W	A	F	Y	H	S	S	L	A	P	T	P	E	L	G	G	C	W	P	P	T	G	I	H	P	L	N	P	L	E	V	P	L	L	N	T	S	V	L	L	A	S	G	V	S	I	T	W	A	H	H	S	L	M	E	G	D	R	K	H	M	L	Q	A	L	F	I	T	I	T	L	G	V	Y	F	T	L	L	Q
Template Known Secondary structure											S			G	G	G	T	S	S	S	S		T	T						T	T	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	M	T	Y	T	L	P	S	L	M	K	S	P	S	G	A	A	F	G	S	V	L	G	L	M	A	F	F	Y	F	F	A	R	L	T	L	F	C	A	A	W	I	A	T	A	E	Y	K	D	D	P	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	E	Y	Y	E	A	P	F	T	I	S	D	G	V	Y	G	S	T	F	F	V	A	T	G	F	H	G	L	H	V	I	I	G	S	T	F	L	I	V	C	F	F	R	Q	L	K	F	H	F	T	S	N	H
Template Known Secondary structure									S	S		T	T	S																																		T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions