Job Description P37642 Confidence 2.26% Date Thu Jan 5 11:56:15 GMT 2012 Rank 78 Aligned Residues 113 % Identity 12% Template d1oede_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		75	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure											.														.	.
Query SS confidence											.														.	.
Query Sequence		Y	F	S	F	L	S	M	I	P	.	I	L	M	V	S	F	A	A	G	G	F	V	L	.	.	A	S	H	P	M	L	L	Q	D	I	F	D	K	I	L	Q	N	I	S	D	P	T	L	A	A	T	L	K	N	T	I	N	T	A	V	Q	Q	R	T	T	V	G	L	V	G	L	A	V	A	L	Y	S	G	I	N
Query Conservation											.														.	.
Alig confidence											.														.	.															.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		F	Y	I	I	N	I	I	A	P	C	V	L	I	S	S	L	V	V	L	V	Y	F	L	P	A	Q	A	G	G	Q	K	C	T	L	S	I	S	V	L	.	.	.	.	.	.	L	A	Q	T	I	F	L	F	L	I	A	Q	K	V	P	E	T	S	L	N	V	P	L	I	G	K	Y	L	I	F	V	M	F	V	S
Template Known Secondary structure		S							T																		T			T	T										.	.	.	.	.	.																					S					S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	G	N	L	R	E	A	I	R	A	Q	S	R	D	V	W	E	R	S	P	Q	D	Q	E	K	F	W	V	K	Y	L	R	D	F	I	S	L	I	G	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	I	V	M	N	C	V	I	V	L	N	V	S	L	R	T	G	K	V	I	D	K	A	C	F	W	I	A	L	L	L	F	S	I	G	T	L	A	I	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions