Job Description P37642 Confidence 3.06% Date Thu Jan 5 11:56:15 GMT 2012 Rank 38 Aligned Residues 118 % Identity 14% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	I	S	L	I	G	L	L	I	A	L	I	V	T	L	S	I	T	S	V	A	G	S	A	Q	Q	M	I	I	S	A	L	H	L	N	S	I	E	W	L	K	P	T	W	R	L	I	G	L	A	I	S	I	F	A	N	Y	L	L	F	F	W	I	F	W	R	L	P	R	H	R	P	R	K	K	A	L	I	R
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		D	V	P	S	L	L	A	T	F	T	F	G	P	V	A	G	I	I	V	A	L	V	K	N	L	L	N	Y	L	F	S	M	G	D	P	V	G	.	.	.	.	.	.	.	.	.	P	F	A	N	F	L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	.	.	.	.	N	K	R	S	T	K	S	L	I	T
Template Known Secondary structure		G								T	T	S																				T	T	T		S	S		.	.	.	.	.	.	.	.	.																				S	.	.	.	.	S	S		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.										.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		G	T	F	L	A	A	I	G	F	E	V	I	K	I	V	M	T	Y	T	L	P	S	L	M	K	.	S	P	S	G	A	A	F	G	S	V	L	G	L	M	A	F	F	Y	F	F	A	R	L	T	L	F
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L
Template Known Secondary structure																			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions