Job Description P37642 Confidence 3.43% Date Thu Jan 5 11:56:15 GMT 2012 Rank 31 Aligned Residues 128 % Identity 11% Template c2ksrA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:neuronal acetylcholine receptor subunit beta-2; PDBTitle: nmr structures of tm domain of the n-acetylcholine receptor b2 subunit Resolution UNK

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		74	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		T	Y	F	S	F	.	L	S	M	I	P	I	L	M	V	S	F	A	A	G	G	F	V	L	A	S	H	P	M	L	L	Q	D	I	F	D	K	I	L	Q	N	I	S	D	P	T	L	A	A	T	L	K	N	T	I	N	T	A	V	Q	Q	R	T	T	V	G	L	V	G	L	A	V	A	L	Y	S	G	I	N	W
Query Conservation							.
Alig confidence							.																								.	.
Template Conservation																															.	.
Template Sequence		L	F	Y	T	I	N	L	I	I	P	C	V	L	I	T	S	L	A	I	L	V	F	Y	L	P	S	D	C	G	.	.	E	K	M	T	L	C	I	S	V	L	L	A	L	T	V	F	L	L	L	I	S	K	I	V	P	P	T	S	L	D	V	P	L	V	G	K	Y	L	M	F	T	M	V	L	V	T	F	S	I
Template Known Secondary structure								T																T	S				S		.	.																						T	T			S	S		T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	N	L	R	E	A	I	R	A	Q	S	R	D	V	W	E	R	S	P	Q	D	Q	E	K	F	W	V	K	Y	L	R	D	F	I	S	L	I	G	L	L	I	A	L	I	V	T	L	S	I	T	S
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		V	T	S	V	C	V	.	L	N	V	H	H	R	S	P	T	T	H	T	P	R	G	G	G	G	Y	V	A	M	V	I	D	R	L	F	L	W	I	F	V	F	V	C	V	F	G	T	I	G	M	F	L
Template Known Secondary structure			T					.					T	S	S					S	S			S	S	S	S	T	T
Template Predicted Secondary structure								.
Template SS confidence
		107	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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