Return to main results Retrieve Phyre Job Id

Job DescriptionP06993
Confidence99.42%DateThu Jan 5 10:59:50 GMT 2012
Rank31Aligned Residues215
% Identity18%Templated1fnna2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PSKLSRPVRLDHTVVRERLLAKLSGA. . . . . . . . . NNFRLALITSPAGYGKTTLISQWAAGK. . . . NDIGWYSLDEGDNQ
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Template Sequence  DSVFSPSYVPKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRN
Template Known Secondary structure  GGGGSTT


S

TT
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S
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   71........80.........90.........100.........110.........120.........130..... ....140.......
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Query Sequence  QERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITN. . . PVIHESMRFFIR
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Template Sequence  FTAIIGEIARSLN. . . . . . . . . . . . IPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADK
Template Known Secondary structure  TT............



SS


TT

TGGGS
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   86...90........ .100.........110.........120.........130.........140.........150...
 
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Query Sequence  HQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRL. . . . . SSPIEAAESSRICDDV. . . . . . .
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Template Sequence  LGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLD
Template Known Secondary structure  SS

SSTTS
TT




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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   216...220.........230
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Query Sequence  . . SGWATALQLIALSAR
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Template Sequence  TNRGDARLAIDILYRSA
Template Known Secondary structure  TTS

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   234.....240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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