Return to main results Retrieve Phyre Job Id

Job DescriptionP06993
Confidence98.09%DateThu Jan 5 10:59:50 GMT 2012
Rank107Aligned Residues176
% Identity15%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VRLDHTVVRERLLAKLSGA. . . . . . . . . . . . . NNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASY
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Template Sequence  YIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAK
Template Known Secondary structure  T
TT




S
SS
S
STTSST
S
GGG
TT

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   510.........520.........530.........540.........550.........560.........570.........580.........
 
   78.80.........90.........100.........110.........120.........130... ......140.......
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Query Sequence  LIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLI. . . . . . . . . . TNPVIHESMRFFIR
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Template Sequence  CQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKK
Template Known Secondary structure  .............................TSS

TT
BTTTTB

TT
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   590. ........600.........610.........620.........630.........640
 
   148.150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  HQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSG
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Template Sequence  APPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELL. . GNFKDKERTTIAQQVKG
Template Known Secondary structure 

STT
S
TT
TTTSS


..T
S
TT
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   641........650.........660.........670.........680.........690. ........700........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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