|   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | V | R | E | R | L | L | A | K | L | S | G | A | N | N | F | R | L | A | L | I | T | S | P | A | G | Y | G | K | T | T | L | I | S | Q | W | A | . |
. |
. |
. |
. |
A | G | K | N | D | I | G | W | Y | S | L | D | E | G | D | N | Q | Q | E | R | F | A | S | Y | L | I | A | A | V | Q | Q | A | T | N | G | H | C |
Query Conservation |   |
  |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | S | G | C | T | G | I | N | D | K | T | L | G | A | R | G | G | E | V | I | M | V | T | S | G | S | G | M | G | K | S | T | F | V | R | Q | Q | A | L | Q | W | G | T | A | M | G | K | K | V | G | L | A | M | L | E | E | S | V | E | E | T | A | E | D | L | I | G | L | H | N | R | V | R | L | R | Q | S | D | S | L |
Template Known Secondary structure |   |
|
| S |
| T | T |  |  |  |  |  |
| S | B |
| T | T |
|  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
289 | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . |
  |
  |   |
91 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | E | T | M | A | Q | K | R | Q | Y | A | S | L | T | S | L | F | A | Q | L | F | I | E | L | A | E | W | H | S | P | L | Y | L | V | I | D | D | Y | H | L | I | T | N | . |
P | V | I | H | E | S | M | R | F | F | I | R | H | Q | P | E | N |
Query Conservation |   |
  |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   | . |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   | . | . |   |
|
Template Sequence |   |
K | R | E | I | I | E | N | G | K | F | D | Q | W | F | D | E | L | F | G | N | D | T | F | H | L | Y | D | S | F | E | A | E | T | D | R | L | L | A | K | L | A | Y | M | R | S | G | L | G | C | D | V | I | I | L | D | H | I | S | I | R | K | M | I | D | N | L | M | T | K | L | K | G | F | A | K | S | . |
. |
T | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
369 | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | |
|
. | . |
  |
  |   |
153 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
L | T | L | V | V | L | S |
Query Conservation |   |
  |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
Template Sequence |   |
V | V | L | V | V | I | C |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
458 | . | 460 | . | . | . | . |
  |