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Job DescriptionP06993
Confidence97.81%DateThu Jan 5 10:59:50 GMT 2012
Rank125Aligned Residues173
% Identity14%Templatec3pe3D_
PDB info PDB header:transferaseChain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n- PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   566...570.........580.........590.........600.........610.........620.........630.........640.....
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Query Sequence  LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYH
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Template Sequence  CPTHADSLNNLANIKREQGNIEEAVRLYRKALEV. . . . . FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF. . .
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   313......320.........330.........340...... ...350.........360.........370.........380....
 
   646...650.........660.........670.........680.........690.........700.........710.........720.....
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Query Sequence  SDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMS
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Template Sequence  . . . . ADAYSNMGNTLKEMQDVQGALQCYTRAIQI. . . . NPAFADAHSNLASIHKDSGNIPEAIASYRTALKL. . . . . . KP
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   385....390.........400.........410.... .....420.........430.........440........ .450
 
   726...730.........740.........750.........760
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Query Sequence  DLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANR
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Template Sequence  DFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAD
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   451........460.........470.........480.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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