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Job DescriptionP06993
Confidence95.11%DateThu Jan 5 10:59:50 GMT 2012
Rank473Aligned Residues129
% Identity18%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.
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Query Sequence  NFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGND
Template Known Secondary structure  TT

STTSSTTSS

STTGGGS
T
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STTSTT

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   615....620.........630.........640.........650.........660.........670.........680.........690....
 
   82.......90.........100.........110.........120.........130.........140.........150.
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Query Sequence  . . . . . . . . . . VQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPE
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Template Sequence  EVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCA
Template Known Secondary structure  T
TSTTGGG
STTSB




S

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T
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   695....700.........710.........720.........730.........740.........750.........760.........770....
 
   152.......
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Query Sequence  NLTLVVLS
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Template Sequence  NRTTIVVA
Template Known Secondary structure  TS
Template Predicted Secondary structure 

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   775....780..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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