Job Description P06993 Confidence 97.13% Date Thu Jan 5 10:59:50 GMT 2012 Rank 187 Aligned Residues 111 % Identity 14% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		25	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		K	L	S	G	A	N	N	F	R	.	.	.	.	.	.	.	.	L	A	L	I	T	S	P	A	G	Y	G	K	T	T	L	I	S	Q	W	A	A	.	.	.	.	G	K	N	D	I	G	W	Y	S	L	D	E	G	D	N	Q	Q	E	R	F	A	S	Y	L	I	A	A	V	Q	Q	A	T	N	G	H	C	A	I
Query Conservation											.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																						.	.	.	.																																		.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		M	M	N	I	A	L	S	G	E	I	T	G	G	M	Q	S	G	L	L	I	L	A	G	P	S	K	S	F	K	S	N	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A	Y	L	R	S	M	G	V	D	P	E	R	V	I	H	.	.	.	.	.
Template Known Secondary structure									S	S	T	T					S									S	S	S	S																	T	T								S	S											T	T			G	G	G				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		C	E	T	M	A	Q	K	R	Q	Y	A	S	L	T	S	L	F	A	Q	L	F	I	E	L	.	.	A	E	W	H	S	P	L	Y	L	V	I	D	D	Y	H	L	I	T	N	P	V	I	H	E	S	M	R	F	F	I	R
Query Conservation																										.	.
Alig confidence		.	.	.	.	.	.	.																		.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	P	V	Q	S	L	E	Q	L	R	I	D	M	V	N	Q	L	D	A	I	E	R	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	R	A	K	T	M	K	S	L	F	R
Template Known Secondary structure		.	.	.	.	.	.	.				S	B														T			T	T										S	T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions