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Job DescriptionP06993
Confidence97.63%DateThu Jan 5 10:59:50 GMT 2012
Rank134Aligned Residues253
% Identity12%Templatec3ceqB_
PDB info PDB header:motor protein, transport proteinChain: B: PDB Molecule:kinesin light chain 2; PDBTitle: the tpr domain of human kinesin light chain 2 (hklc2)
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   505....510.........520. ........530.........540.........550.........560.........570.........580..
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Query Sequence  TRSLALMQQTEQMARQH. . DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA
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Template Sequence  GSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK
Template Known Secondary structure  TT
SSSTT

TT
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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   583......590.........600....... ..610.........620.........630.........640.........650........
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Query Sequence  WARLDEAEASARSGIEVLSSYQPQQ. . . . QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVI
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Template Conservation                                                                                  
Template Sequence  RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLAS
Template Known Secondary structure  T

TT
TTT
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   295....300.........310.........320.........330.........340.........350.........360.........370....
 
   659660.........670........ .680.........690.........700.........710.........720.........730...
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Query Sequence  YWQMTGDKAAAANWLRHTAK. . . . . PEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLL
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Template Conservation                                                       
                 
  
     
Template Sequence  CYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRS
Template Known Secondary structure  T

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TT



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   375....380.........390.........400.........410.........420.........430.........440.........450....
 
   734.....740.........750.......
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Query Sequence  LNQLYWQAGRKSDAQRVLLDALKL
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Template Sequence  LGALYRRQGKLEAAHTLEDCASRN
Template Known Secondary structure  TT
T
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   455....460.........470........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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