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Job DescriptionP06993
Confidence98.83%DateThu Jan 5 10:59:50 GMT 2012
Rank64Aligned Residues185
% Identity18%Templatec3b9pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20........ .30.........40.........50.........60.........70...
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Query Sequence  RPVRLDHTVVRERLLAKLSG. . . . . . . . . . . . . . . ANNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQER
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Template Sequence  AKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLT. . . .
Template Known Secondary structure  S


GGGS


T
GGGS
GGG


SSSSSS
TT
STTTS....
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   478.480.........490.........500.........510.........520.........530.........540.........550...
 
   74.....80.........90.........100.........110.........120.........130... ......140.......
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Query Sequence  FASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLI. . . . . . TNPVIHESMRFFIR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . SKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSEREASRRLKTEFLVEFDG
Template Known Secondary structure  ..........................SSS
S
T
STGGGTSB



S
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   554.....560.........570.........580.........590.........600.......
 
   148.150.........160.........170.........180.........190......... 200.........210....... ..220...
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Query Sequence  HQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRL. . . SSPIEAAESSRICDDVSG. WATALQ
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Template Sequence  L. . PRIVVLAATNRPQELDEAALRRFTKRVYVS. . . . LPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLT
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S
GGGB




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   613 ......620.........630.........640... ......650.........660.........670.........680......
 
   224.....
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Query Sequence  LIALSA
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Template Sequence  ALAKDA
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   693.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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