Job Description P06993 Confidence 95.97% Date Thu Jan 5 10:59:50 GMT 2012 Rank 364 Aligned Residues 117 % Identity 13% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		N	F	R	L	A	L	I	T	S	P	A	G	Y	G	K	T	.	.	.	.	.	T	L	I	S	Q	W	A	A	G	K	N	D	I	G	W	Y	S	L	D	E	G	D	N	Q	Q	E	R	F	A	S	Y	L	I	A	A	V	Q	Q	A	T	N	G	H	C	A	I	C	E	T	M	A	Q	K	R	Q	Y	A	S	L
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	Q	Q	R	L	R	T	A	V	L	A	.	.	.	.	.	.	.	.	.	.	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H
Template Known Secondary structure		T	T									T	T	S		T	T	T	T												T	T								.	.	.	.	.	.	.	.	.	.		S											T	T	T	S										S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.											.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	F	A	Q	L	F	I	E	L	A	E	W	H	S	P	L	Y	L	V	I	D	D	Y	H	L	I	T	N	P	V	I	H	E	S	M	R	F	F	I	R	H	Q	P	E	N	L	T	L	V	V	L	S
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		A	T	L	T	H	R	L	M	S	.	.	P	N	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	A	T	K	V	E	L	G	E	A	A	A	I	F	M	T
Template Known Secondary structure										S	.	.							S					S	S	T	T			S																T	T	S
Template Predicted Secondary structure											.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions