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Job DescriptionP06993
Confidence98.67%DateThu Jan 5 10:59:50 GMT 2012
Rank71Aligned Residues200
% Identity13%Templatec2z4rB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa
Resolution3.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SKLSRPVRLDHTV. VRERLL. . . . . . AKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASY
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Template Sequence  TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYV. VQNEPDLRVMYITSEKFLND
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   96...100.........110.........120.........130.........140.........150.... .....160.........170....
 
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Query Sequence  LIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFF. . . . IRHQPENL
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Template Sequence  LVDSMKEGK. . . . . . . . . . . . . . . . . . . . . . . . LNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQI
Template Known Secondary structure  TS
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Query Sequence  TLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRL. . . SSPIEAAESSRICDDVSGWATALQLIALSA
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Template Sequence  VICSDREPQKLSEFQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKL
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   231........240.........250.........260.........270.........280.........290.........300.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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