 |
Job Description | P06993 | Confidence | 96.71% | Date | Thu Jan 5 10:59:50 GMT 2012 |
Rank | 234 | Aligned Residues | 42 |
% Identity | 14% | Template | c2w0sB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:thymidylate kinase; |
PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate
|
Resolution | 2.92 Å |
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | F | R | L | A | L | I | T | S | P | A | G | Y | G | K | T | T | L | I | S | Q | W | A | A | G | K | N | D | I | G | W | Y | S | L | D | E | G | D | N | Q | Q | E |
Query Conservation |   |
  |   |   |   |
|   |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|   |
|   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | G | A | L | I | V | F | E | G | L | D | K | S | G | K | T | T | Q | C | M | N | I | M | E | S | I | P | A | N | T | I | K | Y | L | N | F | P | Q | R | S | T | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | S |  |  |  |  |  | S | S |
| T | T | S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|