Job Description P06993 Confidence 96.89% Date Thu Jan 5 10:59:50 GMT 2012 Rank 214 Aligned Residues 147 % Identity 13% Template c2r9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp synthase subunit alpha; PDBTitle: crystal structure of atp synthase subunit alpha (tm1612) from2 thermotoga maritima at 2.10 a resolution Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	K	L	S	R	P	V	R	L	D	H	T	V	V	R	E	R	L	L	A	K	L	S	G	A	N	N	F	R	L	A	L	I	T	S	P	A	G	Y	G	K	T	T	L	I	S	Q	W	A	A	G	K	N	D	I	G	W	Y	S	L	D	E	G	D	N	Q	Q	E	R	F	A	S	Y	L	I	A	A	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	V	I	Y	R	K	P	V	D	T	P	L	Q	T	G	I	K	A	I	D	S	X	I	P	I	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	I	A	I	D	T	I	I	N	Q	K	G	Q	G	V	Y	C	I	Y	V	A	I	G	Q	K	K	S	A	I	A	R	I	I	D	K	L	R
Template Known Secondary structure				G	G	G	B					S					S								S				T	T		B							T	T	S	S											T	T	T	T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		Q	A	T	N	G	H	C	A	I	C	E	T	M	A	Q	K	R	Q	Y	A	S	L	T	S	L	F	A	Q	L	F	I	.	.	.	E	L	A	E	W	H	S	P	L	Y	L	V	I	D	D	Y	H	L	I	T	N	P	V	I	H	E	S	M	R	F	F	I	R	H	Q	P	E	N
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																				.	.
Template Conservation																																																							.	.
Template Sequence		Q	Y	G	A	X	E	Y	T	T	V	V	V	A	S	A	S	D	P	A	S	L	Q	Y	I	A	P	Y	A	G	C	A	X	G	E	Y	F	A	Y	S	G	R	D	A	L	V	V	Y	D	D	L	S	K	H	.	.	A	V	A	Y	R	Q	L	S	L	L	X	R	R	P	P	G	R
Template Known Secondary structure			T	T	G	G	G	G								T	T	S																					T	T	T									T					.	.										T	S				T	T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions