Job Description P06993 Confidence 99.81% Date Thu Jan 5 10:59:50 GMT 2012 Rank 10 Aligned Residues 321 % Identity 13% Template c2qenA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:walker-type atpase; PDBTitle: the walker-type atpase paby2304 of pyrococcus abyssi Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		M	L	I	P	S	K	L	S	R	P	V	R	L	D	H	T	V	V	R	E	R	L	L	A	K	L	S	G	A	.	N	N	F	R	L	A	L	I	T	S	P	A	G	Y	G	K	T	T	L	I	S	Q	W	A	A	G	K	N	D	I	G	W	Y	S	L	D	E	G	D	N	Q	Q	E	R	F	A	S	Y	L	I
Query Conservation																															.
Alig confidence								.	.																						.
Template Conservation								.	.
Template Sequence		M	L	F	D	L	R	.	.	P	K	T	R	R	E	D	I	F	D	R	E	E	E	S	R	K	L	E	E	S	L	E	N	Y	P	L	T	L	L	L	G	I	R	R	V	G	K	S	S	L	L	R	A	F	L	N	E	R	P	G	I	L	I	D	C	R	E	L	Y	A	E	R	G	H	I	T	R	E	E	L	I
Template Known Secondary structure				S			S	.	.				S	G	G	G	S		S																S								T	T	S	S												S	S												T	T	T		B
Template Predicted Secondary structure								.	.
Template SS confidence
		1	.	.	.	.	.			.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		A	A	V	Q	Q	A	T	N	G	H	C	A	I	C	E	T	M	.	.	.	.	.	.	.	.	A	Q	K	R	Q	Y	A	S	L	T	S	L	F	A	Q	L	F	I	E	L	A	E	W	H	S	P	L	Y	L	V	I	D	D	Y	H	L	I	T	.	.	.	.	.	.	N	P	V	I	H	E	S	M	R	F	F
Query Conservation																			.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	L	Q	S	T	I	S	P	F	Q	K	F	Q	S	K	F	K	I	S	L	N	L	K	F	L	T	L	E	P	R	K	L	S	L	R	E	V	F	R	E	L	N	D	L	G	E	E	L	G	E	F	I	V	A	F	D	E	A	Q	Y	L	R	F	Y	G	S	R	G	G	K	E	L	L	A	L	F	A	Y	A
Template Known Secondary structure								S		S									T						G	G	G	T	S		G	G	G																		S								T	G	G	G	G	G	G	B	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																						.	.	.
Query SS confidence																			.	.	.	.																																						.	.	.
Query Sequence		I	R	H	Q	P	E	N	L	T	L	V	V	L	S	R	N	L	.	.	.	.	P	Q	L	G	I	A	N	L	R	V	R	D	Q	L	L	E	I	G	S	Q	Q	L	A	F	T	H	Q	E	A	K	Q	F	F	D	C	R	L	.	.	.	S	S	P	I	E	A	A	E	S	S	R	I	C	D	D	V	S	G	W
Query Conservation																			.	.	.	.																																						.	.	.
Alig confidence																			.	.	.	.																																						.	.	.
Template Conservation
Template Sequence		Y	D	S	L	P	N	L	K	I	I	L	T	G	S	E	V	G	L	L	H	D	F	L	K	I	T	D	Y	E	S	P	L	Y	G	R	I	A	G	E	V	L	V	K	P	F	D	K	D	T	S	V	E	F	L	K	R	G	F	R	E	V	N	L	D	V	P	E	N	E	I	E	E	A	V	E	L	L	D	G	I
Template Known Secondary structure						T	T								S	S										T	T		T	T	S	T	T	T	T																										T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	T	A	L	Q	L	I	A	L	S	A	R	Q	N	T	H	S	A	H	K	S	A	R	R	L	A	G	I	N	A	S	H	L	S	D	Y	L	V	D	E	V	L	D	N	V	D	L	A	T	R	H	F	L	L	K	S	A	I	L	R	S	M	N	D	A	L	I	T	R	V	T	G	E	E	N	G	Q	M	R	.
Query Conservation																																																																																	.
Alig confidence																											.	.	.																																																				.
Template Conservation																											.	.	.
Template Sequence		P	G	W	L	V	V	F	G	V	E	Y	L	R	N	G	D	F	G	R	A	M	K	R	T	L	.	.	.	E	V	A	K	G	L	I	M	G	E	L	E	E	L	R	R	R	S	P	R	Y	V	D	I	L	R	A	I	A	L	G	Y	N	R	W	S	L	I	R	D	Y	L	A	V	K	G	T	K	I	P	E	P
Template Known Secondary structure																											.	.	.																														T	T			S											T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
							298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	E	E	I	E	R	Q	G	L	F	L	Q	R	M	D	D	T	G	E	W	F	C	Y	H	P	L	F	G	N	F	L	R
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.												.	.	.
Template Conservation																		.	.	.
Template Sequence		R	L	Y	A	L	L	E	N	L	K	K	M	N	W	I	V	.	.	.	E	E	D	N	T	Y	K	I	A	D	P	V	V	A	T	V	L	R
Template Known Secondary structure													T	T	S			.	.	.			T	T					S	S								T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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