Return to main results Retrieve Phyre Job Id

Job DescriptionP06993
Confidence95.47%DateThu Jan 5 10:59:50 GMT 2012
Rank436Aligned Residues55
% Identity20%Templatec2o3fC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:putative hth-type transcriptional regulator ybbh; PDBTitle: structural genomics, the crystal structure of the n-2 terminal domain of the putative transcriptional regulator3 ybbh from bacillus subtilis subsp. subtilis str. 168.
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   834.....840....... ..850.........860.........870.........880.........890...
Predicted Secondary structure 



.....











Query SS confidence 













. . . . .













































Query Sequence  SPLTQREWQVLGLI. . . . . YSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQL
Query Conservation    

 

 

  
 .....
 
 

 


  
 

  


 

  

 



 

 


  

 
Alig confidence 













.....



















....



.
















Template Conservation    

  
  

 

         

  

    

 


.... 

 .



 

 

  
  

Template Sequence  XHLPPSERKLADYILAHPHAIESTVNEISALANSSDAAV. . . . IRLC. SLGLKGFQDLXRVAGDL
Template Known Secondary structure 







TT

T

....
.

S
SSTTT

Template Predicted Secondary structure 







.....



Template SS confidence 
































































   12.......20.........30.........40.........50 .... .....60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions