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Job DescriptionP06993
Confidence96.23%DateThu Jan 5 10:59:50 GMT 2012
Rank314Aligned Residues123
% Identity11%Templatec2jlrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:serine protease subunit ns3; PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NFRLALITSPAGYGKT. . . . . TLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASL
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Template Sequence  KKRLTIMDLHPGAGKTKRILPSIVREALKRRLRTLILA. . . . . . PTRVVAAEMEEALRGLPIRYQTPAVKSDHTGREIVD
Template Known Secondary structure  TT



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Query Sequence  TSLFAQLFIELAE. . . WHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLS
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Template Sequence  LMCHATFTTRLLSSTRVPNYNLIVMDEAHFTDPCSVAARGYISTRVEMGEAAAIFMT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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