Return to main results Retrieve Phyre Job Id

Job DescriptionP06993
Confidence96.71%DateThu Jan 5 10:59:50 GMT 2012
Rank236Aligned Residues127
% Identity13%Templatec2jizD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:atp synthase subunit beta; PDBTitle: the structure of f1-atpase inhibited by resveratrol.
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50...... ...60.........70.........
Predicted Secondary structure 


























....







Query SS confidence 




















































. . . .






















Query Sequence  PSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGK. . . . NDIGWYSLDEGDNQQERFASYLI
Query Conservation    
   
      


   
  
        
 
 
  




 
        ....                     
 
Alig confidence 




















































....






















Template Conservation 
    
    


 






 
 






  
 
  
 


 
   
          
 
   



  

 
    
Template Sequence  PEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEM
Template Known Secondary structure 

GGG







S
S
TT
STTSSTTT
SSSS
Template Predicted Secondary structure 


































Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........200
 
   80.........90.........100.........110....... ..120.........130
Predicted Secondary structure 










.......





Query SS confidence 





































. . . . . . .












Query Sequence  AAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELA. . . . . . . EWHSPLYLVIDDY
Query Conservation    
                              
  
 .......    
 





 
Alig confidence 





































.......












Template Conservation     
         




 



     
  
   
 







  
  


  


Template Sequence  IESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Template Known Secondary structure  TSS
SSSS



TTS
SS



T
Template Predicted Secondary structure 






















Template SS confidence 

























































   201........210.........220.........230.........240.........250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions