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Job DescriptionP06993
Confidence98.05%DateThu Jan 5 10:59:50 GMT 2012
Rank112Aligned Residues216
% Identity8%Templatec2ifuA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:gamma-snap; PDBTitle: crystal structure of a gamma-snap from danio rerio
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   542.......550....... ..560.........570.........580.........590.........600......... 610.......
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Query Sequence  GFLQTAWETQEKAFQL. . . INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQL. QCLAMLIQ
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Template Sequence  QKISEAHEHIAKAEKYLKTSFXKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGX
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SSS
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TT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   618.620.........630.........640.........650.........660.........670.........680.........690.......
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Query Sequence  CSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARA
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Template Sequence  XLKDLQRXPEAVQYIEKASVXYVENGTPDTAAXALDRAGKLXEPLDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRL
Template Known Secondary structure  TT
GGGGTTT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   698.700.........710.........720.........730.........740.........750.......
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Query Sequence  QILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL
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Template Sequence  LVRQQKFDEAAASLQKEKSXYKEXENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSI
Template Known Secondary structure  TT
TT
TT
TTS
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   163......170.........180.........190.........200.........210.........220..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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