 |
Job Description | P06993 | Confidence | 96.62% | Date | Thu Jan 5 10:59:50 GMT 2012 |
Rank | 248 | Aligned Residues | 94 |
% Identity | 16% | Template | c1zu4A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:ftsy; |
PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212
|
Resolution | 1.95 Å |
|
 |
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | F | R | L | A | L | I | T | S | P | A | G | Y | G | K | T | T | L | I | S | Q | W | A | A | G | K | N | D | I | G | W | Y | S | L | D | E | G | D | N | Q | Q | E | R | F | A | S | Y | L | I | A | A | V | Q | Q | A | T | N | . |
G | H | C | A | I | C | E | T | M | A | Q | K | R | Q | Y | A | S | L | T | S | L |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|   | . | . | . |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
N | R | L | N | I | F | M | L | V | G | V | N | G | T | G | K | T | T | S | L | A | K | M | A | N | Y | Y | A | E | L | G | Y | K | V | L | I | A | A | A | D | T | . |
. |
. |
F | R | A | G | A | T | Q | Q | L | E | E | W | I | K | T | R | L | N | N | K | V | D | L | V | K | A | N | K | L | N | A | D | P | A | S | V |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  | S | S | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|
| . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
| T | T |  |  |  |  |
|
| S | S | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 |
  |
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | Q | L | F | I | E | L | A | E | W | H | S | P | L | Y | L | V |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Template Sequence |   |
V | F | D | A | I | K | K | A | K | E | Q | N | Y | D | L | L | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|