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Job DescriptionP06993
Confidence96.52%DateThu Jan 5 10:59:50 GMT 2012
Rank263Aligned Residues123
% Identity14%Templatec1qzwC_
PDB info PDB header:signaling protein/rnaChain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication
Resolution4.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLF
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Template Sequence  KLPFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRP. . . . . . AAYDQLLQLGNQIGVQVYGEPNNQNPIEIA
Template Known Secondary structure  SSS

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Query Sequence  AQLFIELAEWHSPLYLVIDDY. . HLITNPV. . IHESMRFFIRHQPENLTLVVLS
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Template Sequence  KKGVDIFVKNKMD. IIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDA
Template Known Secondary structure  TT
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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