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Job Description | P06993 | Confidence | 96.52% | Date | Thu Jan 5 10:59:50 GMT 2012 |
Rank | 263 | Aligned Residues | 123 |
% Identity | 14% | Template | c1qzwC_ |
PDB info |
PDB header:signaling protein/rna | Chain: C: PDB Molecule:signal recognition 54 kda protein; |
PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication
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Resolution | 4.10 Å |
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30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | N | F | R | L | A | L | I | T | S | P | A | G | Y | G | K | T | T | L | I | S | Q | W | A | A | G | K | N | D | I | G | W | Y | S | L | D | E | G | D | N | Q | Q | E | R | F | A | S | Y | L | I | A | A | V | Q | Q | A | T | N | G | H | C | A | I | C | E | T | M | A | Q | K | R | Q | Y | A | S | L | T | S | L | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | L | P | F | I | I | M | L | V | G | V | Q | G | S | G | K | T | T | T | A | G | K | L | A | Y | F | Y | K | K | R | G | Y | K | V | G | L | V | A | A | D | V | Y | R | P | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
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. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
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110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | Q | L | F | I | E | L | A | E | W | H | S | P | L | Y | L | V | I | D | D | Y | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | K | G | V | D | I | F | V | K | N | K | M | D | . |
I | I | I | V | D | T | A | G | R | H | G | Y | G | E | E | T | K | L | L | E | E | M | K | E | M | Y | D | V | L | K | P | D | D | V | I | L | V | I | D | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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