 |
Job Description | P0AGL2 | Confidence | 99.96% | Date | Thu Jan 5 11:29:25 GMT 2012 |
Rank | 31 | Aligned Residues | 113 |
% Identity | 22% | Template | c3i3fB_ |
PDB info |
PDB header:unknown function | Chain: B: PDB Molecule:hypothetical protein; |
PDBTitle: hypothetical protein from giardia lamblia gl50803_14299
|
Resolution | 1.35 Å |
|
 |
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | G | P | Y | V | Q | G | V | D | L | G | S | M | V | F | T | S | G | Q | I | P | V | C | P | Q | T | G | E | I | P | A | D | V | Q | D | Q | A | R | L | S | L | E | N | V | K | A | I | V | V | A | A | G | L | S | V | G | D | I | I | K | M | T | V | F | I | T | D | L | . |
. |
. |
N | D | F | A | T | I | N | E |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |
| . |   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | F | E | N | V | G | Q | I | A | V | V | N | G | M | V | Y | L | G | G | S | V | G | I | D | K | S | G | T | L | . |
H | K | G | L | E | E | Q | T | R | Q | T | F | D | N | I | R | K | C | L | E | Y | A | N | S | G | L | D | Y | I | V | S | L | N | I | F | L | S | T | S | L | S | D | S | E | E | A | R | F | N | E |
Template Known Secondary structure |   |
|
| T | T |
|
|
|  |  |  |  | T | T |  |  |  |  |
|
| B |
| S | B |
| T | T | S |
| B | . |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Y | K | Q | F | F | D | E | H | Q | A | T | Y | P | T | R | S | C | V | Q | V | A | R | L | P | K | D | V | K | L | E | I | E | A | I | A | V | R | S |
Query Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   | . |   |   |   |   |
|
|
|   |   |
|   | . |   |   |
|   |   |   |   |
|
|
|
|   |   |
|
|
|   |   |
Template Sequence |   |
L | Y | R | E | V | F | C | V | . |
P | A | T | R | P | C | R | C | C | V | R | . |
A | Q | L | Q | E | G | L | L | V | E | V | V | N | V | V | A | A | Q |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
| . | G | G | G |
|
|  |  |  |  |  |  | . |  |
|
| S | T | T |
| S |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . |
|
|
|
|
|
|  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|