Job Description P0AGL2 Confidence 3.08% Date Thu Jan 5 11:29:25 GMT 2012 Rank 88 Aligned Residues 56 % Identity 16% Template c2xg8D_ PDB info PDB header:transcription Chain: D: PDB Molecule:pipx; PDBTitle: structural basis of gene regulation by protein pii: the2 crystal complex of pii and pipx from synechococcus3 elongatus pcc 7942 Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	M	V	F	T	S	G	Q	I	P	V	C	P	Q	T	G	E	I	P	A	D	V	Q	D	Q	A	R	L	S	L	E	N	V	K	A	I	V	V	A	A	G	L	S	V	G	D	I	I	K	M	T	V	F	I	T	D	L	N	D	F	A	T	I	N	E	V	Y	K	Q	F	F
Query Conservation
Alig confidence									.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	R	L	F	F	L	.	.	.	V	A	F	D	A	R	G	T	R	F	E	P	I	G	R	N	E	A	R	M	L	V	D	N	R	L	R	Q	L	R	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	Q	E	Y	N	Q	L	Q	Q	V	F	K	Q	T	F
Template Known Secondary structure		S	S						.	.	.					S	S	S																								T			.	.	.	.	.	.	.	.	.	.	.	.	.	.																T
Template Predicted Secondary structure									.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.															.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions