Job Description P0AGL2 Confidence 3.65% Date Thu Jan 5 11:29:25 GMT 2012 Rank 75 Aligned Residues 45 % Identity 13% Template c1d3uA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:tata-binding protein; PDBTitle: tata-binding protein/transcription factor (ii)b/bre+tata-2 box complex from pyrococcus woesei Resolution 2.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	F	T	S	G	Q	I	P	V	C	P	Q	T	G	E	I	P	A	D	V	Q	D	Q	A	R	L	S	L	E	N	V	K	A	I	V	V	A	A	G	L	S	V	G	D	I	I	K	M	T	V
Query Conservation
Alig confidence																.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		L	I	F	S	S	G	K	L	V	V	T	G	A	K	.	.	.	.	.	.	S	V	Q	D	I	E	R	A	V	A	K	L	A	Q	K	L	K	S	I	G	V	K	F	K	R	A	P	Q	I	D	V
Template Known Secondary structure					T	T	S								S	.	.	.	.	.	.	S																	T	T	T				S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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