Return to main results Retrieve Phyre Job Id

Job DescriptionP67127
Confidence1.16%DateThu Jan 5 12:10:29 GMT 2012
Rank62Aligned Residues11
% Identity27%Templatec1erfA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:transmembrane glycoprotein; PDBTitle: conformational mapping of the n-terminal fusion peptide of2 hiv-1 gp41 using 13c-enhanced fourier transform infrared3 spectroscopy (ftir)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   188.190........
Predicted Secondary structure 
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Query Sequence  LALSFLILVGF
Query Conservation       
  

 
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Template Conservation 


 






Template Sequence  IGALFLGFLGA
Template Known Secondary structure 
Template Predicted Secondary structure 
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   4.....10....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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