 |
Job Description | P77216 | Confidence | 66.90% | Date | Thu Jan 5 12:26:29 GMT 2012 |
Rank | 61 | Aligned Residues | 52 |
% Identity | 21% | Template | d2j01u1 |
SCOP info | PABP domain-like
| Ribosomal protein L20
| Ribosomal protein L20
|
Resolution | 2.8 |
|
  |   |
215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | W | T | W | Y | A | N | H | Q | S | L | C | N | P | L | Y | N | L | M | Y | Q | A | G | V | P | L | R | H | M | R | I | C | E | P | F | G | P | E | Q | R | Q | G | L | W | L | Y | H | V | I | E | P | D | R | W | A | A | M | C | A | R | V | S | G | V |
Query Conservation |   |
|
|   |
|
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |
|   |   |
|
|   |
|
|   |
|
|   |   |   |   |
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
Template Sequence |   |
I | N | A | A | C | R | Q | H | G | L | N | Y | S | T | F | I | H | G | L | K | K | A | G | I | E | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | K | N | L | A | D | L | A | V | R | E | P | Q | V | F | A | E | L | V | E | R | A | K | A | A |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
| S |
| S | . | . | . | . | . | . | . | . | . | . | . | . |
| T | T | T | T | T | T | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|