Job Description P77216 Confidence 99.20% Date Thu Jan 5 12:26:29 GMT 2012 Rank 17 Aligned Residues 209 % Identity 13% Template c3p52B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: nh3-dependent nad synthetase from campylobacter jejuni subsp. jejuni2 nctc 11168 in complex with the nitrate ion Resolution 2.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		L	N	I	L	E	A	A	R	E	R	I	T	W	T	L	N	T	L	.	.	P	R	V	C	V	S	F	S	G	G	K	D	S	G	L	M	L	H	L	T	A	E	L	A	R	Q	M	G	K	K	I	C	V	L	F	I	D	W	E	A	Q	F	S	C	T	I	N	Y	V	Q	S	L	R	E	L	Y	T	D	V	I
Query Conservation																				.	.
Alig confidence																				.	.																								.	.	.
Template Conservation																																													.	.	.
Template Sequence		Q	K	I	T	E	K	X	C	D	F	I	Q	E	K	V	K	N	S	Q	S	Q	G	V	V	L	G	L	S	G	G	I	D	S	A	L	V	A	T	L	C	K	R	A	.	.	.	L	K	E	N	V	F	A	L	L	X	P	T	Q	I	S	N	K	A	N	L	E	D	A	L	R	L	C	A	D	L	N	L	E	Y
Template Known Secondary structure																		T	S	S		S								S	S														.	.	.		T	T									S			S	S															T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	F	Y	W	V	A	L	P	L	T	T	Q	N	S	L	S	Q	Y	Q	P	E	W	Q	C	W	E	P	D	V	E	W	V	R	Q	P	P	Q	D	A	I	T	D	P	D	F	F	C	F	Y	Q	P	G	M	T	F	E	Q	F	V	R	E	F	A	E	W	F	S	Q	K	R	P	A	A	M	M	I	G	I	R
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Sequence		K	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	Q	S	I	L	D	A	F	I	K	Q	S	E	N	T	T	L	V	S	L	G	N	F	A	A	R	I	R	X	.	.	.	.	S	L	L	Y	D	Y	S	A	L	K	N	S	L	V	I	G	T	S	N	K
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T		S																	.	.	.	.										T	T				B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template SS confidence
		81	.	.																								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	E	S	Y	N	R	F	V	A	I	A	S	L	N	K	Q	R	F	A	D	D	K	P	W	T	T	A	A	P	G	G	H	S	W	Y	I	Y	P	I	Y	D	W	K	V	A	D	I	W	T	W	Y	A	N	H	Q	S	L	C	N	P	L	Y	N	L	M	Y	Q	A	G	V	P	L	R	H	M	R	I	C	E
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																								.																			.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																								.																			.	.	.
Template Sequence		S	E	L	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	G	T	I	Y	G	D	L	A	C	.	A	F	N	P	I	G	S	L	Y	K	S	E	I	Y	A	L	A	K	Y	L	N	L	H	.	E	N	F	I	K	K	G	F	S	Y	T	K	I	D	E	G	L	K	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S		T	T	T	T	T			.	S	B		T	T	T	T	S												T	T			.																			.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																								.																			.	.	.
Template SS confidence
		134	.	.	.	.																			.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	G	P	E	Q	R	Q	G	L	W	L	Y	H	V	I	E	P	D	R	W	A	A	M	C	A	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	L	E	T	N	D	E	K	L	L	R	T	L	D	P	S	L	I	A	X	L	K	N	R
Template Known Secondary structure		.	.	.				T	T								S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions