Job Description P77216 Confidence 98.00% Date Thu Jan 5 12:26:29 GMT 2012 Rank 41 Aligned Residues 187 % Identity 14% Template c3dpiA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nad+ synthetase; PDBTitle: crystal structure of nad+ synthetase from burkholderia pseudomallei Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																													.
Query SS confidence																													.	.																													.
Query Sequence		M	S	I	Y	K	I	P	L	P	L	N	I	L	E	A	A	R	E	R	I	T	W	T	L	N	T	L	.	.	P	R	V	C	V	S	F	S	G	G	K	D	S	G	L	M	L	H	L	T	A	E	L	A	R	Q	M	G	.	K	K	I	C	V	L	F	I	D	W	E	A	Q	F	S	C	T	I	N	Y	V	Q
Query Conservation																													.	.																													.
Alig confidence																													.	.																													.
Template Conservation
Template Sequence		L	H	V	S	P	T	F	D	A	R	D	E	A	E	R	R	I	G	F	V	A	D	Y	L	R	T	A	G	L	R	A	C	V	L	G	I	S	G	G	I	D	S	S	T	A	G	R	L	A	Q	L	A	V	E	R	L	R	A	S	G	Y	D	A	R	F	V	A	M	R	L	P	Y	G	A	E	A	D	A	R	R
Template Known Secondary structure		T	T			S	S																						T										S	S																				T	T												S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	R	E	L	Y	T	D	V	I	E	E	F	Y	W	V	A	L	P	L	T	T	Q	N	S	L	S	Q	Y	Q	P	E	W	Q	C	W	E	P	D	V	E	W	V	R	Q	P	P	Q	D	A	I	T	D	P	D	F	F	C	F	Y	Q	P	G	M	T	F	E	Q	F	V	R	E	F	A	E	W	F	S	Q	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	A	F	V	R	A	.	.	.	.	.	.	.	.	.	.	D	E	T	L	T	V	D	V	K	P	A	A	D	A	M	L	.	.	.	.	.	.	.	.	.	.	A	A	L	A	A	G	G	L	A	Y	L	D	H	A	Q	Q	D	F	V	L	G	N	I	K	A	R	E	R	M	I	A	Q	Y	A	V	A	G
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	S																.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.											.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	P	A	A	M	M	I	G	I	R	.	A	D	E	S	Y	N	R	F	V	A	I	A	S	L	N	K	Q	R	F	A	D	D	K	P	W	T	T	A	A	P	G	G	H	S	W	Y	I	Y	P	I	Y	D	W	K	V	A	D	I	W	T	W	Y	A	N	H	Q	S	L
Query Conservation												.
Alig confidence												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	N	G	V	V	I	G	T	D	H	A	A	E	S	V	M	G	F	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	D	G	G	A	D	V	L	P	L	A	G	L	T	K	R	R	V	R	A	L	A	R	M	L	G	A	D
Template Known Secondary structure			T	T				B																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	B		T	T	T	T													T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions