Job Description P77216 Confidence 99.06% Date Thu Jan 5 12:26:29 GMT 2012 Rank 20 Aligned Residues 168 % Identity 14% Template c2e18B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of project ph0182 from pyrococcus horikoshii ot3 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	E	A	A	R	E	R	I	T	W	T	L	N	T	.	.	L	P	R	V	C	V	S	F	S	G	G	K	D	S	G	L	M	L	H	L	T	A	E	L	A	R	Q	M	G	K	K	I	C	V	L	F	I	D	W	E	A	Q	F	S	C	T	I	N	Y	V	Q	S	L	R	E	L	Y	T	D	V	I	E	E	F
Query Conservation																.	.
Alig confidence																.	.																														.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		Y	D	K	V	I	E	R	I	L	E	F	I	R	E	K	G	N	N	G	V	V	I	G	I	S	G	G	V	D	S	A	T	V	A	Y	L	A	T	K	A	L	G	K	E	K	.	.	.	.	V	L	G	L	I	M	P	Y	F	E	N	K	D	V	E	D	A	K	L	V	A	E	K	L	G	I	G	Y	K	V	I
Template Known Secondary structure																		T	T								S	S																G	G	G	.	.	.	.								S	S		S														T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	W	V	A	L	P	L	T	T	Q	N	S	L	S	Q	Y	Q	P	E	W	Q	C	W	E	P	D	V	E	W	V	R	Q	P	P	Q	D	A	I	T	D	P	D	F	F	C	F	Y	Q	P	G	M	T	F	E	Q	F	V	R	E	F	A	E	W	F	S	Q	K	R	P	A	A	M	M	I	G	I	R	A	D	E
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		N	I	K	P	I	V	D	S	F	V	E	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	N	L	D	R	K	G	L	G	N	I	M	S	R	T	R	M	I	M	L	Y	A	H	A	N	S	L	G	R	I	V	L	G	T	S	.	N	R	S	E
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																											T								.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.																											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	N	R	F	V	A	I	A	S	L	N	K	Q	R	F	A	D	D	K	P	W	T	T	A	A	P	G	G	H	S	W	Y	I	Y	P	I	Y	D	W	K	V	A	D	I	W	T	W	Y	A	N	H	Q	S	L	C	N	P	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	T	G	Y	F	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	D	G	A	S	D	Y	A	P	I	I	N	L	Y	K	T	E	V	W	E	I	A	K	R	I	G	V	P	E	R	I	V
Template Known Secondary structure					T		S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T		S	S	B		T	T	T	T	S												T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.																			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions