Job Description P77216 Confidence 98.87% Date Thu Jan 5 12:26:29 GMT 2012 Rank 27 Aligned Residues 160 % Identity 13% Template c1vl2C_ PDB info PDB header:ligase Chain: C: PDB Molecule:argininosuccinate synthase; PDBTitle: crystal structure of argininosuccinate synthase (tm1780) from2 thermotoga maritima at 1.65 a resolution Resolution 1.65 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	V	C	V	S	F	S	G	G	K	D	S	G	L	M	L	H	L	T	A	E	L	A	R	Q	M	G	K	K	I	C	V	L	F	I	D	W	E	A	Q	F	S	C	T	I	N	Y	V	Q	S	L	R	E	L	Y	T	D	V	I	E	E	F	Y	W	V	A	L	P	L	T	T	Q	N	S	L	S	Q	Y	Q
Query Conservation
Alig confidence																								.	.	.	.														.	.
Template Conservation																								.	.	.	.														.	.
Template Sequence		E	K	V	V	L	A	Y	S	G	G	L	D	T	S	V	I	L	K	W	L	C	E	.	.	.	.	K	G	F	D	V	I	A	Y	V	A	N	V	G	.	.	Q	K	D	D	F	V	A	I	K	E	K	A	L	K	T	G	A	S	K	V	Y	V	E	D	L	R	R	E	F	V	T	D	Y	I	F	T	A	L	L
Template Known Secondary structure										S	S													.	.	.	.	T	T										S	S	.	.																T		S															T						T
Template Predicted Secondary structure																								.	.	.	.														.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		P	E	W	Q	C	W	E	P	D	V	E	W	V	R	Q	P	P	Q	D	A	I	T	D	P	D	F	F	C	F	Y	Q	P	G	M	T	F	E	Q	F	V	R	E	F	A	E	W	F	S	Q	K	R	P	A	A	M	M	I	G	.	I	R	A	D	E	S	Y	N	R	F	V	A	I	A	S	L	N	K	Q	R	F
Query Conservation																																																												.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.																	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template Sequence		G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	Y	E	G	R	Y	L	L	G	T	A	I	A	R	P	L	I	A	K	R	Q	V	E	I	A	E	K	E	G	A	Q	Y	V	A	H	G	A	T	G	K	G	N	D	Q	V	R	F	E	L	T	Y	A	A	.	.	.	.	.
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	T	B																							T		S								T	T	S	S												.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.
Template SS confidence
		77	.																				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		A	D	D	K	P	W	T	T	A	A	P	G	G	H	S	W	Y	I	Y	P	I	Y	D	W	.	.	.	.	.	K	V	A	D	I	W	T	W	Y	A	N	H	Q	S	L	C	N
Query Conservation																										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	N	P	N	L	K	V	I	S	P	W	K	D	P	E	F	L	A	K	F	K	T	D	L	I	N	Y	A	M	E	K	G	I	P	I	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			T	T	S					G	G	G								T												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions