 |
Job Description | P77216 | Confidence | 92.83% | Date | Thu Jan 5 12:26:29 GMT 2012 |
Rank | 53 | Aligned Residues | 68 |
% Identity | 15% | Template | c1m1zB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:beta-lactam synthetase; |
PDBTitle: beta-lactam synthetase apo enzyme
|
Resolution | 1.95 Å |
|
 |
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | A | A | R | E | R | I | T | W | T | L | N | T | . |
. |
. |
. |
. |
. |
. |
. |
L | P | R | V | C | V | S | F | S | G | G | K | D | S | G | L | M | L | H | L | T | A | E | L | A | R | Q | M | G | K | K | I | C | V | L | F | I | D | W | E | A | Q | F | S | C | T | I | N | Y | V | Q | S | L | R | E | L | Y | T |
Query Conservation |   |
|
|
|
|   |
|
|
|   |   |   |
|   |   | . | . | . | . | . | . | . | . |
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   | . | . | . | . |   |   |   |   |
|   |
|
|
|   |
|   |   | . |   |   |
|
| . |   |   |   |
|   |   |
|
|   |   |   |
|
Template Sequence |   |
E | G | E | A | V | A | A | V | R | A | A | L | E | K | A | V | A | Q | R | V | T | P | G | D | T | P | L | V | V | L | S | G | G | I | D | S | S | G | V | A | A | C | A | H | R | . |
. |
. |
. |
A | A | G | E | L | D | T | V | S | M | G | T | D | . |
T | S | N | E | . |
F | R | E | A | R | A | V | V | D | H | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| T | T |
|
|
|  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | S | S |
|  |  |  |  |  |  |  | S | . | S |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | |
|
|
|
. | . | . | . | . | . | 270 | . | . | . | . | . | . | |
. | . | . | 280 | |
. | . | . | . | . | . | . | . | . | 290 | . | . |
  |
  |   |
85 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
D | V |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
T | R |
Template Known Secondary structure |   |
|  |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
293 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|