Job Description P43329 Confidence 100.00% Date Thu Jan 5 12:02:17 GMT 2012 Rank 12 Aligned Residues 258 % Identity 19% Template d8ohma2 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase Resolution 2.30

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		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	E	S	H	G	D	I	L	I	F	M	S	G	E	R	E	I	R	D	T	A	D	A	L	N	K	L	N	L	R	H	T	E	I	L	P	L	Y	A	R	L	S	N	S	E	Q	N	R	V	F	Q	S	H	S	G	R	R	I	V	L	A	T	N	V	A	E	T	S	L	T	V	P	G	I	K	Y	V	I
Query Conservation
Alig confidence																															.	.	.																	.	.	.	.	.																					.
Template Conservation																															.	.	.																	.	.	.	.	.																					.
Template Sequence		I	E	V	I	R	G	G	R	H	L	I	F	C	H	S	K	K	K	C	D	E	L	A	A	K	L	S	A	L	.	.	.	G	L	N	A	V	A	Y	Y	R	G	L	D	V	S	V	I	.	.	.	.	.	P	T	S	G	D	V	V	V	V	A	T	D	A	L	M	T	G	Y	T	G	.	D	F	D	S	V	I
Template Known Secondary structure		G	G	G	T	S	S	S							S	S															.	.	.	T								S	S	S		G	G	G	S	.	.	.	.	.		S	S	S	S							T	T	S		T	T	T			.			S
Template Predicted Secondary structure																															.	.	.																	.	.	.	.	.																					.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.				.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400						.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure													.	.	.																																													.
Query SS confidence													.	.	.																																													.
Query Sequence		D	P	G	T	A	R	I	S	R	Y	S	.	.	.	Y	R	T	K	V	Q	R	L	P	I	E	P	I	S	Q	A	S	A	N	Q	R	K	G	R	C	G	R	V	S	E	G	I	C	I	R	L	Y	S	E	D	D	F	L	S	.	R	P	E	F	T	D	P	E	I	L	R	T	N	L	A	S	V	I	L	Q	M
Query Conservation													.	.	.																																													.
Alig confidence													.	.	.																																													.
Template Conservation
Template Sequence		D	C	N	T	C	V	T	Q	T	V	D	F	S	L	D	P	T	F	T	I	D	T	T	T	V	P	Q	D	A	V	S	R	S	Q	R	R	G	R	T	G	R	G	R	R	G	I	Y	R	F	V	T	P	G	E	R	P	S	G	M	F	D	S	S	V	L	C	E	C	Y	D	A	G	C	A	W	Y	E	L	T	P
Template Known Secondary structure																S	S	S											B									T	T	S		S	S	S							S	S				B		S	S	B			T													T	S
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		T	A	L	G	L	G	D	I	A	A	F	P	F	V	.	E	A	P	D	K	R	N	I	Q	D	G	V	R	L	L	E	E	L	G	A	I	T	T	D	E	Q	A	S	A	Y	K	L	T	P	L	G	R	Q	L	S	Q	L	P	V	D	P	R	L	A	R	M	V	L	E	A	Q	K	H	G	C	V	R	E	A	M
Query Conservation																.
Alig confidence																.																								.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		A	E	T	S	V	R	L	R	A	Y	L	N	T	P	G	L	P	V	C	Q	D	H	L	E	F	W	E	S	V	F	T	G	L	T	H	I	D	A	.	.	.	.	.	.	H	F	L	S	Q	T	K	Q	A	G	D	N	F	P	Y	L	V	A	Y	Q	A	T	V	C	A	R	A	Q	A	P	P	P	S	W	D	Q
Template Known Secondary structure													T	S	T	T	S		B														T							.	.	.	.	.	.										T		S															T	T				S			S	G
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.							.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.			.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		I	I	T	S	A	L	S	I	Q	D	P	R	E	R	P	M	D	.	.	K	Q	Q	A	S	D	E	K	H	R	R	F	H	D	K	E	S	D	F	L	A
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		M	W	K	S	L	T	R	L	K	P	T	L	H	G	P	T	P	L	L	Y	R	L	G	A	L	Q	N	E	V	T	L	T	H	P	V	T	K	F	I	M
Template Known Secondary structure		G	G	G	G	G	G	G	G	T	T	T			S					S	S			S				S				S		S
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions