Return to main results Retrieve Phyre Job Id

Job DescriptionP43329
Confidence99.56%DateThu Jan 5 12:02:17 GMT 2012
Rank56Aligned Residues164
% Identity15%Templated2p6ra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  QDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDH
Query Conservation   


 

  





 












 


 
    
 
  







 


 


 


  

  


 



  
Alig confidence 
































.













































Template Conservation    

  
    
 

 







    
    .            
   
  
                          
Template Sequence  AEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVR. EAIKGGKSLYVVPLRALAGEKYESFKKWEKIGLRIGISTGDYESRD
Template Known Secondary structure  TT
S

SS.TT

SSTTTTTTT


SS
B

S
Template Predicted Secondary structure 









.
























Template SS confidence 















































































   31........40.........50.........60... ......70.........80.........90.........100.........
 
   164.. ...170.........180...... ...190.........200...... ...210.........220.........230.. ......
Predicted Secondary structure 


.






.











..







.
Query SS confidence 


.



















.



















. .

























.





Query Sequence  VSD. NTMVKLMTDGILLAEIQQDR. LLMQYDTIIIDEAHERSLNI. . DFLLGYLKELLPRRPDLKIIITSATI. DPERFS
Query Conservation   
 . 
 
   








  

. 
  

 










 
..
 

 


 

  
 










.
 
 
 
Alig confidence 


.



















.



















..

























.





Template Conservation         
 
 
                     
 

 
              
  
         
 



  
   
 
Template Sequence  EHLGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLSATAPNVTEIA
Template Known Secondary structure  S
STT
STT
SGGGG

TTGGGGG
TTT
TT



TT
Template Predicted Secondary structure 




































Template SS confidence 















































































   110.........120.........130.........140.........150.........160.........170.........180.........
 
   239240........
Predicted Secondary structure 



Query SS confidence 









Query Sequence  RHFNNAPIIE
Query Conservation   

  



 
Alig confidence 









Template Conservation    
       
Template Sequence  EWLDADYYVS
Template Known Secondary structure  TT

Template Predicted Secondary structure 


Template SS confidence 









   190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions