Return to main results Retrieve Phyre Job Id

Job DescriptionP43329
Confidence99.95%DateThu Jan 5 12:02:17 GMT 2012
Rank23Aligned Residues279
% Identity19%Templated2bmfa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase
Resolution2.41

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  EAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDN
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Template Sequence  DIFRKKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEALRGL. . . . . . . . . . . . . . PIRYQTGR
Template Known Secondary structure  SSSSTT



TTSSTTTTT

SSTTTS..............

B




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   181........190.........200.........210.........220.........230........ .240......
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  TMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPII
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Template Sequence  EIVDLMCHATFTMRLLSPIRVPNYNLIIMDEAHFTDPASIAARGYISTRVEM. GEAAGIFMTATP. . . . . . . . . . PGSRD
Template Known Secondary structure 
STSSS




SSTT

S.TS

SS
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   255....260.........270.........280.........290.........300...... ...310........ .320...
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  EVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARL
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Template Sequence  PFPQSNAPIMDEEREIPERSWNSGHEWVT. . . . . . . . . . . DFKGKTVWFVPSIKAGNDIAACLRKN. . . GKKVIQLSRKT
Template Known Secondary structure  SS


SS





S

SS

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S

S
...T




TT
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   324.....330.........340.........350.. .......360.........370........ .380.........
 
   328.330.........340.........350.........360...... ...370.........380.........390.........400......
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Query Sequence  SNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDP. GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEG
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Template Sequence  FDSEYIKTRT. . NDWDFVVTTDISEMGANFKAERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVGRNPKN
Template Known Secondary structure  GGGGGT..S

S
GGGGTT




S


SSS


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   390......... 400.........410.........420.........430.........440.........450.........460.......
 
   407
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Query Sequence  I
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Template Sequence  E
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   468
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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