Job Description P43329 Confidence 100.00% Date Thu Jan 5 12:02:17 GMT 2012 Rank 15 Aligned Residues 247 % Identity 19% Template d1yksa2 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase Resolution 1.80

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	Q	E	S	H	G	D	I	L	I	F	M	S	G	E	R	E	I	R	D	T	A	D	A	L	N	K	L	N	L	R	H	T	E	I	L	P	L	Y	A	R	L	S	N	S	E	Q	N	R	V	F	Q	S	H	S	G	R	R	I	V	L	A	T	N	V	A	E	T	S	L	T	V	P	G	I	K	Y	V
Query Conservation
Alig confidence																																.	.	.														.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																.	.	.														.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		D	W	I	L	A	D	K	R	P	T	A	W	F	L	P	S	I	R	A	A	N	V	M	A	A	S	L	R	K	A	.	.	.	G	K	S	V	V	V	L	N	R	K	T	F	E	.	.	.	.	.	.	.	.	.	.	K	K	P	D	F	I	L	A	T	D	I	A	E	M	G	A	N	L	.	C	V	E	R	V
Template Known Secondary structure									S							S															T	.	.	.	T								S	S	S			.	.	.	.	.	.	.	.	.	.				S					S	S	S	T	T			T	T		.			S
Template Predicted Secondary structure																																.	.	.														.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.	390	.	.	.	.	.	.											.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.
		364	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		I	D	P	G	T	A	.	R	I	S	R	Y	S	Y	R	T	K	V	Q	R	L	P	I	E	P	I	S	Q	A	S	A	N	Q	R	K	G	R	C	G	R	V	S	E	G	I	C	I	R	L	Y	S	E	D	D	F	L	S	R	P	E	F	T	D	P	E	I	L	R	T	N	L	A	S	V	I	L	Q	M	T	A
Query Conservation								.
Alig confidence								.																																					.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		L	D	C	R	T	A	F	K	P	V	L	V	D	E	G	R	K	V	A	I	K	G	P	L	R	I	S	A	S	S	A	A	Q	R	R	G	R	I	G	R	N	P	N	.	.	.	.	R	D	G	D	S	Y	Y	Y	S	E	P	T	S	E	N	N	A	H	H	V	C	W	L	E	A	S	M	L	L	D	N	M	E
Template Known Secondary structure														T	T	T	T																				T	T	S	S			T	T	.	.	.	.										S							T	T	B											T	T	S
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470					.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.						.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		L	G	L	G	D	I	A	A	F	P	F	V	E	A	P	D	K	R	N	I	Q	.	.	.	.	.	D	G	V	R	L	L	E	E	L	G	A	I	T	T	D	E	Q	A	S	A	Y	K	L	T	P	L	G	R	Q	L	S	Q	L	P	V	D	P	R	L	A	R	M	V	L	E	A	Q	K	H	G	C	V	R	E
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.																		.	.	.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		V	R	G	G	M	V	A	P	L	Y	G	V	E	G	T	K	T	P	V	S	P	G	E	M	R	L	R	D	D	Q	R	K	V	F	R	E	L	V	R	N	C	D	L	.	.	.	.	.	P	V	W	L	S	W	Q	V	A	K	A	G	L	K	T	N	D	R	K	W	C	F	E	G	P	E	E	H	E	I	L	N
Template Known Secondary structure			G	G	G						S	T	T					S	S	S		T	T	T	T																T	T			.	.	.	.	.											T	T			T	T			G	G	G	S		S		G	G	G			B
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.						.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
							518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	M	I	I	T	S	A	L	S	I	Q	D	P	R	E	R	P	M	D	K	Q	Q	A	S	D	E	K	H	R	R	F	H	D	K	E	S	D	F	L	A	F	V
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																															.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		D	S	G	E	T	V	K	C	R	A	P	G	G	A	K	K	P	L	R	P	R	W	C	D	E	R	V	S	S	D	Q	S	A	L	S	.	.	.	.	.	.	E	F	I	K	F	A
Template Known Secondary structure		T	T	S		B						T	T	S								S	S			G	G	G	S	S	S						.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.							.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions