Return to main results Retrieve Phyre Job Id

Job DescriptionP43329
Confidence99.65%DateThu Jan 5 12:02:17 GMT 2012
Rank51Aligned Residues136
% Identity18%Templated1yksa1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120.........130.........140.........150.........160.........
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  IRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM
Query Conservation 
  





 












 


 
    
 
  







 


 


 


  

  


 



   
  
 
Alig confidence 























































......

















Template Conservation 
  
   

   





                  
   
   
  
        ......                  
Template Sequence  LKKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGL. . . . . . DVKFHTQAFSAHGSGREV
Template Known Secondary structure  TSTT



TTSSTTTTTT

SSTTTS......
SS






SS

Template Predicted Secondary structure 


















......












Template SS confidence 















































































   188.190.........200.........210.........220.........230.........240... ......250.........260.
 
   170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 
























Query SS confidence 






























































Query Sequence  VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATI
Query Conservation 
   








  

 
  

 










 

 

 


 

  
 










Alig confidence 
















































.












Template Conservation                          






                  .      
 




Template Sequence  IDAMCHATLTYRMLEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRAR. ANESATILMTATP
Template Known Secondary structure  TSSS




STTTT

S.TTS

SS
Template Predicted Secondary structure 












.







Template SS confidence 






























































   262.......270.........280.........290.........300.........310 .........320...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions