Job Description P43329 Confidence 99.19% Date Thu Jan 5 12:02:17 GMT 2012 Rank 79 Aligned Residues 166 % Identity 20% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.
Query Sequence		S	Q	K	K	Q	D	I	L	E	A	I	R	D	H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	.	.	.	.	.	.	E	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C
Query Conservation																																						.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.																													.
Template Conservation																																																																								.
Template Sequence		T	E	I	Q	H	K	S	I	R	P	L	L	E	G	R	D	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L	I	L	S	P	T	R	E	L	A	M	Q	T	F	G	V	L	K	.	E	L	M	T	H	H	V	H	T
Template Known Secondary structure															T									T	T	S																	T	T			G	G	G									S	S													.			T	T	T			S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.
		154	.	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																			.	.
Query SS confidence															.	.	.	.	.	.																			.	.
Query Sequence		I	G	Y	K	V	R	F	S	D	H	V	S	D	.	.	.	.	.	.	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	.	.	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I
Query Conservation															.	.	.	.	.	.																			.	.
Alig confidence															.	.	.	.	.	.																			.	.																	.
Template Conservation																																																									.
Template Sequence		Y	G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	P	G	F	M	Y	K	N	L	Q	C	L	V	I	D	E	A	D	.	R	I	L	D	V	G	F	E	E	E	L	K	Q	I	I	K	L	L	P	T	R	R	Q	T
Template Known Secondary structure							S	S	S														S																	T	T				T	T								S			.					T	T												S		S	S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		226	.	.	.	230	.	.	.	.			.	.	.	.	.		240	.	.	.	.	.	.	.
Predicted Secondary structure											.	.						.
Query SS confidence											.	.						.
Query Sequence		I	I	T	S	A	T	I	D	P	.	.	E	R	F	S	R	.	H	F	N	N	A	P	I	I
Query Conservation											.	.						.
Alig confidence											.	.						.
Template Conservation
Template Sequence		M	L	F	S	A	T	Q	T	R	K	V	E	D	L	A	R	I	S	L	K	K	E	P	L	Y
Template Known Secondary structure						S	S														S	S
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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