Job Description P43329 Confidence 96.72% Date Thu Jan 5 12:02:17 GMT 2012 Rank 200 Aligned Residues 121 % Identity 13% Template c3iytG_ PDB info PDB header:apoptosis Chain: G: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: structure of an apoptosome-procaspase-9 card complex Resolution 9.50 Å

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		84	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure													.	.	.	.																					.	.	.													.	.	.
Query SS confidence													.	.	.	.																					.	.	.													.	.	.
Query Sequence		Q	D	I	L	E	A	I	R	D	H	Q	.	.	.	.	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	.	.	.	M	E	L	G	R	G	I	K	G	L	I	G	.	.	.	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C
Query Conservation													.	.	.	.																					.	.	.													.	.	.
Alig confidence													.	.	.	.																					.	.	.													.	.	.
Template Conservation
Template Sequence		N	A	I	Q	Q	K	L	S	K	L	K	G	E	P	G	W	V	T	I	H	G	M	A	G	C	G	K	S	V	L	A	A	E	A	V	R	D	H	S	L	L	E	G	C	F	P	G	G	V	H	W	V	S	V	G	K	Q	D	K	S	G	L	L	M	K	L	Q	N	L	C	T	R	L	D	Q	D	E	S	F	S
Template Known Secondary structure									T	T	S	T	T	S										T	T	S	S																				T	T									S																			S	S			S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	L	P	L	N	I	E	E	.	.	.	.	.	.	.	.	.	.	A	K	D	R	L	R	I	L	M	L	R	K	H	P	R	S	.	.	.	.	L	L	I	L	D	D	V	W	D	.	.	.	.	.	.	.	.	.	.	.	S	W	V	L	K	A	F	D	S	Q	C	Q	I	L	L	T	T
Template Known Secondary structure		S	S				S				.	.	.	.	.	.	.	.	.	.												T		T	T		.	.	.	.										.	.	.	.	.	.	.	.	.	.	.						T	T		S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.											.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions