Job Description P43329 Confidence 100.00% Date Thu Jan 5 12:02:17 GMT 2012 Rank 8 Aligned Residues 233 % Identity 29% Template c3i4uA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dhx8; PDBTitle: crystal structure analysis of a helicase associated domain Resolution 2.10 Å

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		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	R	N	I	Q	D	G	V	R	L	L	E	E	L	G	A	I	T	T	D	E	Q	A	S	A	Y	K	L	T	P	L	G	R	Q	L	S	Q	L	P	V	D	P	R	L	A	R	M	V	L	E	A	Q	K	H	G	C	V	R	E	A	M	I	I	T	S	A	L	S	I	Q	D	P	R	E	R	P	M	D	K
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		P	M	E	T	L	I	T	A	M	E	Q	L	Y	T	L	G	A	L	D	D	E	G	L	.	.	.	.	.	L	T	R	L	G	R	R	M	A	E	F	P	L	E	P	M	L	C	K	M	L	I	M	S	V	H	L	G	C	S	E	E	M	L	T	I	V	S	M	L	S	V	Q	N	V	F	Y	R	P	K	D	K
Template Known Secondary structure																	T	S	B		T	T	S		.	.	.	.	.	B								T	T	S		S														T	T													T	S	S			B				G	G	G
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.						.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	S	D	E	K	H	R	R	F	H	D	K	E	S	D	F	L	A	F	V	N	L	W	N	Y	L	G	E	Q	Q	K	A	L	S	S	N	A	F	R	R	L	C	R	T	D	Y	L	N	Y	L	R	V	R	E	W	Q	D	I	Y	T	Q	L	R	Q	V	V	K	E	L	G	I	P	V	N	S	E	P	A
Query Conservation
Alig confidence																																				.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		Q	A	L	A	D	Q	K	K	A	K	F	H	Q	T	E	G	D	H	L	T	L	L	A	V	Y	N	S	W	K	N	N	K	F	S	.	.	.	.	.	.	N	P	W	C	Y	E	N	F	I	Q	A	R	S	L	R	R	A	Q	D	I	R	K	Q	M	L	G	I	M	D	R	H	K	L	D	V	V	S	C	G	K
Template Known Secondary structure											T	T		B	T	T	B															T	T	T		.	.	.	.	.	.							T	T	B																						T	T							T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		1025	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.							.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	R	E	I	H	I	A	L	L	T	G	L	L	S	H	I	G	M	K	D	A	D	K	Q	E	Y	T	G	A	R	N	A	R	F	S	I	F	P	G	S	G	L	F	K	K	P	P	K	W	V	M	V	A	E	L	V	E	T	S	R	L	W	G	R	I	A	A	R	I	D	P	E	W	V	E	P	V	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	V	R	V	Q	K	A	I	C	S	G	F	F	R	N	A	A	K	K	D	P	Q	E	G	Y	R	T	L	I	D	Q	Q	V	V	Y	I	H	P	S	S	A	L	F	N	R	Q	P	E	W	V	V	Y	H	E	L	V	L	T	T	K	E	Y	M	R	E	V	T	T	I	D	P	R	W	L	V	E	F	A	P
Template Known Secondary structure			T												G	G	G						S	S	S	S				T	T	T								T	T	S	T	T	T	T	S			S										S	S	S																			T
Template Predicted Secondary structure
Template SS confidence
		1099	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.
		698	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	F	K
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		1179	1180	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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