Job Description P43329 Confidence 98.78% Date Thu Jan 5 12:02:17 GMT 2012 Rank 127 Aligned Residues 167 % Identity 21% Template c3fe2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx5; PDBTitle: human dead-box rna helicase ddx5 (p68), conserved domain i in complex2 with adp Resolution 2.60 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.																														.	.	.
Query SS confidence																																							.	.	.	.	.	.	.																														.	.	.
Query Sequence		S	Q	K	K	Q	D	I	L	E	A	I	R	D	H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	.	.	.	.	.	.	.	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	.	.	.	L	K	T	E
Query Conservation																																							.	.	.	.	.	.	.																														.	.	.
Alig confidence																																							.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		T	A	I	Q	A	Q	G	W	P	V	A	L	S	G	L	D	M	V	G	V	A	Q	T	G	S	G	K	T	L	S	Y	L	L	P	A	I	V	H	I	N	H	Q	P	F	L	E	R	G	D	G	P	I	C	L	V	L	A	P	T	R	E	L	A	Q	Q	V	Q	Q	V	A	A	E	Y	C	R	A	C	R	L	K
Template Known Secondary structure														T	T									T	T	S																T	S					T	T				S						S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure														.	.																										.
Query SS confidence														.	.																										.
Query Sequence		P	G	G	C	I	G	Y	K	V	R	F	S	.	.	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	L	L	A	E	I	Q	Q	D	R	.	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I
Query Conservation														.	.																										.
Alig confidence														.	.																										.															.
Template Conservation																																																								.
Template Sequence		S	T	C	I	Y	G	G	A	P	K	G	P	Q	I	R	D	L	E	R	G	V	E	I	C	I	A	T	P	G	R	L	I	D	F	L	E	C	G	K	T	N	L	R	R	T	T	Y	L	V	L	D	E	A	D	.	R	M	L	D	M	G	F	E	P	Q	I	R	K	I	V	D	Q	I	R	P	D	R	Q	T	L
Template Known Secondary structure							T	T	S											S			S															T	T	S				T	T							T	T			.					T	T											T	S		T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		227	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		I	T	S	A	T	I	D	P	.	.	E	R	F	S	R	H	F	N	N	A	P	I	I
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		M	W	S	A	T	W	P	K	E	V	R	Q	L	A	E	D	F	L	K	D	Y	I	H
Template Known Secondary structure					S															S	S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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