Job Description P43329 Confidence 98.10% Date Thu Jan 5 12:02:17 GMT 2012 Rank 148 Aligned Residues 154 % Identity 14% Template c3ezkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dna packaging protein gp17; PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal2 structures and cryo-em reconstructions Resolution 34.00 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.
Predicted Secondary structure																																							.																																		.	.	.
Query SS confidence																																							.																																		.	.	.
Query Sequence		S	Q	K	K	Q	D	I	L	E	A	I	R	D	H	Q	V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	.	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	.	.	.	P	G	G	C	I	G
Query Conservation																																							.																																		.	.	.
Alig confidence																																							.																																		.	.	.
Template Conservation
Template Sequence		R	D	Y	Q	R	D	M	L	K	I	M	S	S	K	R	M	T	V	C	N	L	S	R	Q	L	G	K	T	T	V	V	A	I	F	L	A	H	F	V	C	F	N	K	D	K	A	V	G	I	L	A	H	K	G	S	M	S	A	E	V	L	D	R	T	K	Q	A	I	E	L	L	P	D	F	L	Q	P	G	I	V
Template Known Secondary structure																S								T	T	S		T															S	S	S								S	S																T	T	S		T	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M	T	D	G	I	.	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	R	R	P	D	L	K	I	I	I	T	S	A	T	I	D	P
Query Conservation																								.
Alig confidence																								.					.	.	.	.	.	.	.																						.
Template Conservation																													.	.	.	.	.	.	.																						.
Template Sequence		E	W	N	K	G	S	I	E	L	D	N	G	S	S	I	G	A	Y	A	S	S	P	D	A	V	R	G	.	.	.	.	.	.	.	N	S	F	A	M	I	Y	I	D	E	C	A	F	I	P	N	F	H	D	S	W	.	L	A	I	Q	P	V	I	S	S	G	R	R	S	K	I	I	I	T	T	T	P	N	G	L
Template Known Secondary structure					T	T					T	T	S																.	.	.	.	.	.	.	S			S						S	G	G	G		S	S						.									S	S	S												S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.																						.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		235	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	S	R	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	F	Y	D	I	W
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions