Job Description P43329 Confidence 98.94% Date Thu Jan 5 12:02:17 GMT 2012 Rank 109 Aligned Residues 122 % Identity 28% Template c3earA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hera; PDBTitle: novel dimerization motif in the dead box rna helicase hera: form 1,2 partial dimer Resolution 2.30 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		Q	A	I	F	D	A	V	D	E	L	S	Q	E	S	H	G	D	I	L	I	F	M	S	G	E	R	E	I	R	D	T	A	D	A	L	N	K	L	N	L	R	H	T	E	I	L	P	L	Y	A	R	L	S	N	S	E	Q	N	R	V	F	Q	.	.	S	H	S	G	R	R	I	V	L	A	T	N	V	A	E	T
Query Conservation																																																																.	.
Alig confidence																																								.	.	.																						.	.
Template Conservation																																								.	.	.
Template Sequence		G	R	L	E	V	L	S	D	L	L	Y	V	A	S	P	D	R	A	M	V	F	T	R	T	K	A	E	T	E	E	I	A	Q	G	L	L	R	L	.	.	.	G	H	P	A	Q	A	L	H	G	D	L	S	Q	G	E	R	E	R	V	L	G	A	F	R	Q	G	E	V	R	V	L	V	A	T	D	V	A	A	R
Template Known Secondary structure		G															S	S						S	S														T	.	.	.	T								T	T	S															T	S								T	T	T	T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	V	P	G	I	K	Y	V	I	D	P	G	T	A	R	I	S	R	Y	S	Y	R	T	K	V	Q	R	L	P	I	E	P	I	S	Q	A	S	A	N	Q	R	K	G	R	C	G	R	V	S	E	G	I	C	I	R	L	Y	S	E	D	D	F	L	S	R
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation													.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		G	L	D	I	P	Q	V	D	L	V	V	.	.	.	.	.	.	.	.	H	Y	R	L	.	.	.	.	.	.	.	.	.	.	P	D	R	A	E	A	Y	Q	H	R	S	G	R	T	G	R	.	.	G	G	R	V	V	L	L	Y	G	P	R	E	R	R	D	V
Template Known Secondary structure		S	S		S			B	S				.	.	.	.	.	.	.	.		S	S		.	.	.	.	.	.	.	.	.	.		S	S									T	T	B			.	.										G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.									.	.	.	.											.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions