Job Description P43329 Confidence 98.96% Date Thu Jan 5 12:02:17 GMT 2012 Rank 107 Aligned Residues 134 % Identity 22% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		V	V	I	V	A	G	E	T	G	S	G	K	T	T	Q	L	P	K	I	C	M	E	.	L	G	R	G	I	K	G	L	I	G	H	T	Q	P	R	R	L	A	A	R	T	V	A	N	R	I	A	E	E	L	K	T	E	P	G	G	C	I	G	Y	K	V	R	F	S	D	H	V	S	D	N	T	M	V	K	L	M
Query Conservation																								.
Alig confidence																								.																																			.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	.	.	.	.	.	V	V	A	E	K	A	K	A	A	T	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S																T	T											S																T				.	.	.	.	.											.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.								.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.															.	.	.
Query SS confidence																																															.	.	.	.	.	.	.															.	.	.
Query Sequence		T	D	G	I	L	L	A	E	I	Q	Q	D	R	L	L	M	Q	Y	D	T	I	I	I	D	E	A	H	E	R	S	L	N	I	D	F	L	L	G	Y	L	K	E	L	L	P	.	.	.	.	.	.	.	R	R	P	D	L	K	I	I	I	T	S	A	T	I	.	.	.	D	P	E	R	F	S	R	H	F	N	N
Query Conservation																																															.	.	.	.	.	.	.															.	.	.
Alig confidence		.	.	.	.																								.																		.	.	.	.	.	.	.															.	.	.
Template Conservation		.	.	.	.																								.
Template Sequence		.	.	.	.	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	.	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V
Template Known Secondary structure		.	.	.	.												T	T		S									.		S	S																		T	T	S	T	T			S								G	G	G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.																								.
Template SS confidence
						235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		244	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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